Read in Xenium (10x Genomics), CosMx (Nanostring), MERSCOPE (Vizgen), STARmapPLUS (Wang et al., 2023, Broad Institute) data as SpatialExperiment or SingleCellExperimentclass object, by specifying read____SXE(return_type = "SPE") or "SCE".
You can install the current version of SpatialExperimentIO from GitHub with:
# install.packages("devtools")
devtools::install_github("estellad/SpatialExperimentIO")