Lisa Boatner's repositories
protein_structure_annotations
Map residue numbers from experimental protein structures to primary protein sequences and calculate the relative solvent accessibility of each residue
residue_function_annotations
Identify small-molecule sites of labeling that are annotated as active sites, binding sites, disulfide bonds and redox active sites
ms_cpdaa_analysis
Mass spectrometry-based chemoproteomics pipeline for analyzing electrophile selectivity and identifying chemoproteomics detected amino acids (CpDAAs).
cyssurfdb
Integrating cell surface cysteine enrichment chemoproteomics, subcellular localization annotations and experimental oxidation measurements to define the cell surface cysteinome.
protein_function_annotations
Quantify the druggable chemical space, functional pathways and protein classes targeted by novel small molecules and state-of-the-art proteomics methodologies