lk96er

awesome-chatgpt-prompts

This repo includes ChatGPT prompt curation to use ChatGPT better.

segment-anything

The repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.

typst

A new markup-based typesetting system that is powerful and easy to learn.

nnn

n³ The unorthodox terminal file manager

dalai

The simplest way to run LLaMA on your local machine

awesome-chatgpt

Curated list of awesome tools, demos, docs for ChatGPT and GPT-3

PathPlanning

Common used path planning algorithms with animations.

tsai

Time series Timeseries Deep Learning Machine Learning Python Pytorch fastai | State-of-the-art Deep Learning library for Time Series and Sequences in Pytorch / fastai

BioGPT

awesome-jupyter

A curated list of awesome Jupyter projects, libraries and resources

awesome-jupyterlab

A curated list of awesome JupyterLab extensions and resources

awesome-gpt4

A curated list of prompts, tools, and resources regarding the GPT-4 language model.

winston

A beautiful and native Reddit client for iOS

AgileRL

Streamlining reinforcement learning with RLOps. State-of-the-art RL algorithms and tools.

squidpy

Spatial Single Cell Analysis in Python

deepcell-tf

Deep Learning Library for Single Cell Analysis

btrack

Bayesian multi-object tracking

sjvisualizer

Library to make animated data visualizations from time series data

LIVECell

smarthomeserver

A simple setup for your own smart home server (on a Raspberry Pi)

Unsuprevised_Seg_via_CNN

An unsupervised (or self-supervised) loss function for binary image segmentation.

MIA

Microsopic Image Analyzer (MIA)

u-shape3D

Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces.

VAMPIRE_open

open source version of VAMPIRE analysis : visually-aided morpho-phenotyping recognition

CAJAL

A Python package using Gromov-Wasserstein distance to compare cell shapes

cellpose-colab

Google Colab notebook for Cellpose

u-integrate

Pipeline for inference of Granger-causal relations in molecular systems to study actin regulation in lamellipodia

YZ_HCP_DNN_Gender_2023

vampire-analysis

VAMPIRE (Visually Aided Morpho-Phenotyping Image Recognition) analysis quantifies and visualizes heterogeneity of cell and nucleus morphology.

Driscoll-Worrying-Paper

Python code used to detect and track blebs frame-to-frame, and to analyze bleb size statistics before and after photoactivation.