ljdursi

beyond-single-core-R

Short tour of parallel and foreach packages, and how to think about scaling data analyses

poapy

A simple Partial Order Aligner based on Lee, Grasso and Sharlow (2002), for education/demonstration purposes

mergevcf

Python package and routines for merging VCF files

make-for-reproducible-data-analysis

rosalind_chapel

Rosalind exercises in chapel

dursi-blog

Content for blog

keycloak_ldap_local

Demo of using Keycloak to provide OAuth2/OIDC authentication using LDAP as a source of identities

new-newsletter-page

Website for the research computing teams newsletter

opa_open_registered_controlled_ex

aoc2021

aoc2022

beacon_permission_service

blog

syndicated blog for research software engineer stories and experiences

bsr

chord_scripts

claims_authz_data

Simple OPA-authorized data filtering example

clinphen_authz_by_column

columnar_genotype_stores

computecanadian

Building a successful, federated computational research enterprise, together

docker_compose_example

Quick docker compose example with API gateway, 2 public-facing services, redis on the back end, and logstash logging

go-model-service

A model variant service demonstarting CanDIG API best practices and stack/tooling.

graphql-wrap-test

Quick test of wrapping GA4GH genomics APIs with GraphQL

h4h_network

opa_sql_clinical

openapi_calls_example

service-registry-ui

simple_permissions

Toy mock for OPA

stork-index-action

Github action for building stork-search indices

toy_dist_claims

Toy distributed claims example

vcfsplit_docker

Split a VCF file using bcftools