Yong Liu's starred repositories
awesome-cheatsheets
👩💻👨💻 Awesome cheatsheets for popular programming languages, frameworks and development tools. They include everything you should know in one single file.
git-recipes
🥡 Git recipes in Chinese by Zhongyi Tong. 高质量的Git中文教程.
expert_readed_books
2021年最新总结,推荐工程师合适读本,计算机科学,软件技术,创业,**类,数学类,人物传记书籍
awesome-cmake
A curated list of awesome CMake resources, scripts, modules and examples.
machine-learning-deep-learning-notes
机器学习、深度学习的学习路径及知识总结
auto-annotation-md
Auto-annotations from Mouse brain development
project_template
An example of how to organize files for a research project to increase reproducibility
fivepseq
An application for analysis of 5′ endpoints distribution in RNA sequencing datasets. This is particularly useful for techniques that capture 5′ monophosphorylated RNAs, such as 5PSeq, PARE-seq or GMUC. It may also be useful for ribosome profiling datasets and alike.The main workflow of fivepseq is intended for downstream analysis of alignment files to describe the distribution of 5′ endpoints of reads relative to translation start and stop sites, as well as relative to amino acids or codons. It also computes frame preference of 5′ endpoint distribution and captures periodicity patterns.
MitoRiboSeq
Codes for processing mitochondrial ribosome profiling data
2018_Bacterial_Pipeline_riboseq
Ribosome profiling pipeline for bacterial samples created by Fuad Mohammad.