liusihan / seGMM

A new tool to infer sex from massively parallel sequencing data.

liusihan/seGMM Issues

error in last step
Updated 3 months ago1
seGMM suitability for imputated genotype arrays
Updated 4 months ago1
Error at GMM model
Updated 8 months ago1
confusing result：sry high coverage but female？
Updated 9 months ago1
seGMM could not be used on those bams aligned to ucsc.hg19.fasta which chromename without prefix "chr" ?
Closed 9 months ago
Mistake in code that classifies XXX
Updated 10 months ago1
Error
Updated 10 months ago1
SegMM running forever
Updated a year ago1
Error in if (G[1] == 1) { : missing value where TRUE/FALSE needed
Closed a year ago
When running: plink --vcf my.vcf --make-bed --out sex/plink An error was occured, please check the parameters!
Updated 3 months ago9
Use `--allow-extra-chr` in plink to accept chrX ALT contigs in VCF
Updated 3 months ago3
Working with non Human data
Updated 2 years ago2
Not finding expected karyotype
Closed 2 years ago4
paste XH.sorted.txt with unsorted Xmap.txt results in error results
Updated 2 years ago2
Very different values with WES data
Closed 2 years ago5
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Updated 2 years ago1