liu-zhiyang

HiC_data

A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.

MAXIM

BEDPEliftOver

liftOver paired end BED file in R

DeepSTARR

Deep learning model built to quantitatively predict the activities of developmental and housekeeping enhancers from DNA sequence in Drosophila melanogaster S2 cells

foobox-cn

CUI 整合 for foobar2000

Guideline-for-Computational-Biology-and-Bioinformatics

How-To-Ask-Questions-The-Smart-Way

本文原文由知名 Hacker Eric S. Raymond 所撰寫，教你如何正確的提出技術問題並獲得你滿意的答案。

learning-bioinformatics-at-home

resources for learning bioinformatics

liu-zhiyang.github.io

nf-circdna

Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from cancer and other eukaryotic cells.

useful-scripts

some useful scripts

shap

A unified approach to explain the output of any machine learning model.