Lisa Malins's repositories
dna-by-davinci
A user-friendly, reproducible, and efficient pipeline to design whole-chromosome paints.
Snakespeare
A simple and entertaining introduction to Snakemake workflows.
Language:HTML000
gh-usernames
repository to illustrate forking and to collect github usernames
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merluvlee
Reference-independent genome comparison by k-mer representation.
Language:Python000
opentope
An open-source pipeline to discover universal epitopes for vaccines.
Language:HTML000
popcorn
A kernel-based distance calculator for protein sequences.
Language:C++000
samsa2
SAMSA pipeline, version 2.0. An open-source metatranscriptomics pipeline for analyzing microbiome data, built around DIAMOND and customizable reference databases.
GPL-3.0000
weekend-plans
BIS 180L Lab 2 (Introduction to Git)
000