linnabrown

run_dbcan

Run_dbcan V4, using genomes/metagenomes/proteomes of any assembled organisms (prokaryotes, fungi, plants, animals, viruses) to search for CAZymes.

Acr_Aca_visualization

topld_api

This is web server API for http://topld.genetics.unc.edu

stable-diffusion-webui

Stable Diffusion web UI

pretty-midi

Utility functions for handling MIDI data in a nice/intuitive way.

sparsegl

:exclamation: This is a read-only mirror of the CRAN R package repository. sparsegl — Sparse Group Lasso. Homepage: https://github.com/dajmcdon/sparsegl/ Report bugs for this package: https://github.com/dajmcdon/sparsegl/issues/

autogroup

Split your big directory [1,2,...,n] into pieces of small directory[1:[1,2,3], 2:[4,5,6], ... n[n+3, n+4, n+5]]

bash_tricks

Bash files that may useful in the future.

bioconda-recipes

Conda recipes for the bioconda channel.

COMP790-melody

Those readme contains our generated polyphonic MIDI format data from COMP 790 Lecture. Those data are in midi format and you can listen to it.

cifar10-fast

Comp790-166-Comp-Bio

Computational Biology- Spring 2021

comp790_101_HW3_figure

daily-llama

meta's LLMA-2 based chat framework, optimized for latest news contents.

dotfiles

cd && git clone --bare https://github.com/craffel/dotfiles.git .dotfiles && git --git-dir=.dotfiles --work-tree=. checkout

gin

Gin is a HTTP web framework written in Go (Golang). It features a Martini-like API with much better performance -- up to 40 times faster. If you need smashing performance, get yourself some Gin.

glmnetPlus

glmnet package with initialization

GMVC

minimum vertex cover algorithm applied to human genetic kinship data (genetic_minimum_vertex_cover)

gwas-lecture

Lectures on Genome Wide Association Studies (GWAS) using Python, Limix and Jupyter Noteboos

hicplus_revised

This is revised scripts of hicplus

linnabrown

linnabrown.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

mmsegmentation

OpenMMLab Semantic Segmentation Toolbox and Benchmark.

myself

plink-ng

A comprehensive update to the PLINK association analysis toolset. Beta testing of the first new version (1.90), focused on speed and memory efficiency improvements, is finishing up. Development is now focused on building out support for multiallelic, phased, and dosage data in PLINK 2.0.

samtools

Tools (written in C using htslib) for manipulating next-generation sequencing data

saveSvgAsPng

Save SVGs as PNGs from the browser.

snpnet

snpnet: Fast and scalable lasso/elastic-net solver for large SNP data

variational-continual-learning

Implementation of the variational continual learning method

vision

Datasets, Transforms and Models specific to Computer Vision