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Limix software (limix)

Limix software

limix

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Limix software's repositories

limix

Linear mixed model for genomic analyses.

Language:PythonLicense:NOASSERTIONStargazers:97Issues:10Issues:87

pandas-plink

PLINK reader for Python.

Language:PythonLicense:MITStargazers:75Issues:4Issues:30

CellRegMap

CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq

Language:PythonLicense:MITStargazers:18Issues:3Issues:1

struct-lmm

Structured Linear Mixed Model is a method to test for loci that interact with multiple environments.

Language:PythonLicense:NOASSERTIONStargazers:12Issues:4Issues:18

chi2comb-py

Python package for linear combination of independent noncentral chi-squared random variables.

Language:PythonLicense:MITStargazers:11Issues:3Issues:10

glimix-core

Fast inference for Generalised Linear Mixed Models.

Language:PythonLicense:MITStargazers:11Issues:2Issues:12

bgen

A BGEN file format reader.

Language:CLicense:MITStargazers:10Issues:2Issues:15

bgen-reader-py

A BGEN file format reader.

Language:PythonLicense:MITStargazers:10Issues:3Issues:45

chiscore

Test statistics derived from linear combination of chi-squared distributions.

Language:PythonLicense:MITStargazers:4Issues:3Issues:1

chi2comb

Linear combination of independent noncentral chi-squared random variables.

Language:C++License:MITStargazers:3Issues:3Issues:0

optimix

Abstract function optimisation.

Language:PythonLicense:MITStargazers:2Issues:2Issues:0

cbgen

Python wrapper around bgen C library.

Language:PythonLicense:MITStargazers:1Issues:4Issues:12

liknorm

Moments of the product of an exponential-family likelihood with a Normal distribution.

Language:CLicense:MITStargazers:1Issues:2Issues:0

numpy-sugar

Missing NumPy functionalities.

Language:PythonLicense:MITStargazers:1Issues:3Issues:0

bgen-feedstock

A conda-smithy repository for bgen.

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bgen-reader-feedstock

A conda-smithy repository for bgen-reader.

License:BSD-3-ClauseStargazers:0Issues:0Issues:0

brent-search

Univariate function optimization based on Brent's method.

Language:PythonLicense:MITStargazers:0Issues:2Issues:0

cbgen-feedstock

A conda-smithy repository for cbgen.

License:BSD-3-ClauseStargazers:0Issues:0Issues:0

chi2comb-py-feedstock

A conda-smithy repository for chi2comb-py.

License:BSD-3-ClauseStargazers:0Issues:3Issues:0

chiscore-feedstock

A conda-smithy repository for chiscore.

License:BSD-3-ClauseStargazers:0Issues:3Issues:0

hcephes-feedstock

A conda-smithy repository for hcephes.

Language:ShellLicense:BSD-3-ClauseStargazers:0Issues:2Issues:0

liknorm-feedstock

A conda-smithy repository for liknorm.

Language:BatchfileLicense:BSD-3-ClauseStargazers:0Issues:2Issues:0

liknorm-py

Liknorm Python wrapper.

Language:PythonLicense:MITStargazers:0Issues:2Issues:1

liknorm-py-feedstock

A conda-smithy repository for liknorm-py.

Language:PythonLicense:BSD-3-ClauseStargazers:0Issues:2Issues:0

limix-sphinx-theme

Sphinx theme to switch code display.

Language:PythonLicense:MITStargazers:0Issues:2Issues:0

ndarray-listener

Implementation of the Observer pattern for NumPy arrays.

Language:PythonLicense:MITStargazers:0Issues:2Issues:0

numpy_sugar-feedstock

A conda-smithy repository for numpy-sugar.

License:BSD-3-ClauseStargazers:0Issues:2Issues:0

pandas-plink-feedstock

A conda-smithy repository for pandas-plink.

License:BSD-3-ClauseStargazers:0Issues:2Issues:0

staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

Language:PythonLicense:BSD-3-ClauseStargazers:0Issues:1Issues:0

struct-lmm-feedstock

A conda-smithy repository for struct-lmm.

License:BSD-3-ClauseStargazers:0Issues:1Issues:0