libor-m

ngs-course

Practice material for NGS and UNIX course.

htc-messages-decrypt

Decrypt backup files created by HTC Messages.

scrimer

A pipeline producing primers for sites distinguishing two close species using transcriptome reads and a reference genome.

gephi-plugins

some improvments for seadragon export plugin, weakly connected components via Disjoint Sets

pybedtools

[fork for fixing bugs] Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)

PyVCF

clone for integrating changes into pyvcf

adark

Automatically exported from code.google.com/p/adark

adegenet

adegenet: a R package for the multivariate analysis of genetic markers

advent-of-code

If I ever produce some more solutions.

angsd

Unofficial repository of http://www.popgen.dk/angsd, created to track changes between versions easily.

bird-intron-primers

Designing primers in 2009 ;)

ceai-raptor-analysis

Challenge solution.

elasticsearch-definitive-guide

gephi

trunk

go-bitops

Common bit operation utility for integer type variable

islands-paper

Detect "islands of speciation" in nightingale genome. This is the analysis part of the paper.

linkiconshim

Automatically exported from code.google.com/p/linkiconshim

ngsClean

bugfixing fork

olfactory

pagedown

Automatically exported from code.google.com/p/pagedown

qr-pay

QR Pay is a chrome extension that tries to extract payment information from selected text and displays it in a QR code according to http://qr-platba.cz/.

savemytabs-chrome-ext

Extenção para o Google chrome. Copia todas as URLs abertas nas abas e mostra para o usuario adcionar aos favoritos ou copia na memoria.

SFS-R-course

Software for Scientists, course on R / tidyverse

structure

A few fixes for http://pritchardlab.stanford.edu/structure.html

transcriptome

Pipeline for Illumina transcriptome data.

vertebrate-GC

GC content analysis in various vertebrate genomes.

vertica-hyperloglog