lgsaber

ThermoMPNN

GNN trained to predict changes in thermodynamic stability for protein point mutants

ppde

Official repository for "Plug & Play Directed Evolution for Proteins with Gradient-Based Discrete MCMC"

LFM

Official PyTorch implementation of the paper: Flow Matching in Latent Space

conditional-flow-matching

TorchCFM: a Conditional Flow Matching library

modAL

A modular active learning framework for Python

superfold

GWG_release

Official release of code for "Oops I Took A Gradient: Scalable Sampling for Discrete Distributions"

MASS

MASS: Masked Sequence to Sequence Pre-training for Language Generation

GraphGym

Platform for designing and evaluating Graph Neural Networks (GNN)

deepsnap

Python library assists deep learning on graphs

python-coding-interview

A middle-to-high level open source algorithm book designed with coding interview at heart!

G2SAT

G2SAT: Learning to Generate SAT Formulas

P-GNN

Position-aware Graph Neural Networks

rl_graph_generation

graph-generation

GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Models

crop_yield_prediction

Crop Yield Prediction with Deep Learning

HierTCN

Hierarchical Temporal Convolutional Networks for Dynamic Recommender Systems

agents

TF-Agents: A reliable, scalable and easy to use TensorFlow library for Contextual Bandits and Reinforcement Learning.

convert_torch_to_pytorch

Convert torch t7 model to pytorch model and source.

age-gender-estimation

Keras implementation of a CNN network for age and gender estimation

wide-resnet.pytorch

Best CIFAR-10, CIFAR-100 results with wide-residual networks using PyTorch

SufficientInputSubsets

Code for Sufficient Input Subsets Paper

bb-opt

beakerx

Beaker Extensions for Jupyter Notebook

DeepLearnToolboxPlus

modified DeepLearnToolbox, with more functions.

deeplift

Public facing deeplift repo

fb-caffe-exts

Some handy utility libraries and tools for the Caffe deep learning framework.

census

Sequencing library complexity estimation.

Deep_Inside_Convolutional_Networks

This is a caffe implementation to visualize the learnt model

MatlabCNN

Matlab codes for 2D Convolutional Neural Network