Lee S. Leavitt's repositories
cellTypePredictor
Constellation Pharmcology's various neural networks (NN), and various NN experiments . See leeLeavitt/peakDeepDetect for more work on this subject
conda-env-builder
Build and maintain multiple custom conda environments all in one place.
conda-lock
Lightweight lockfile for conda environments
condformat
R package to apply conditional formatting rules to a data.frame
constPharmSST
Software prototype for calcium imaging plus single cell transcriptome incorporation
peakDeepDetect
Software to automatically detect responses in calcium imaging data.
procPharm
Calcium Imaging Analysis
utah_transcriptome_pharmer
Access and use the tool
Constellation-Pharmacology-Orignal-machine-learning
A Machine Learning Library implemented in the R Language using data.tree package from R.
pybedtools
Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)
python_pharmer
Using Python to process the video files collected from Nis elements with ROI's collected from CellProfiler
samr
:exclamation: This is a read-only mirror of the CRAN R package repository. samr — SAM: Significance Analysis of Microarrays. Homepage: https://statweb.stanford.edu/~tibs/SAM