Learning Matter @ MIT (learningmatter-mit)

Learning Matter @ MIT

learningmatter-mit

Geek Repo

Rafael Gomez-Bombarelli Group @ MIT

Home Page:https://gomezbombarelli.mit.edu/

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Learning Matter @ MIT's repositories

NeuralForceField

Neural Network Force Field based on PyTorch

Language:Jupyter NotebookLicense:MITStargazers:226Issues:7Issues:19

geom

GEOM: Energy-annotated molecular conformations

Language:Jupyter NotebookStargazers:189Issues:10Issues:13

peptimizer

Peptide optimization with Machine Learning

Language:Jupyter NotebookStargazers:66Issues:8Issues:8

PatentChem

Downloads USPTO patents and finds molecules related to keyword queries

Language:PythonLicense:MITStargazers:41Issues:7Issues:1

Atomistic-Adversarial-Attacks

Code for performing adversarial attacks on atomistic systems using NN potentials

Language:PythonLicense:MITStargazers:30Issues:5Issues:1

uvvisml

Predict optical properties of molecules with machine learning.

Language:Jupyter NotebookLicense:MITStargazers:21Issues:4Issues:0

GLAMOUR

Graph Learning over Macromolecule Representations

Language:Jupyter NotebookStargazers:20Issues:3Issues:8

surface-sampling

MCMC-based algorithm for sampling surface reconstructions

Language:Jupyter NotebookLicense:MITStargazers:14Issues:4Issues:3

Chem-prop-pred

Repository for predicting conductivities through Arrhenius parameters for polymer electrolytes.

Language:PythonLicense:MITStargazers:13Issues:3Issues:3

alchemical-mlip

Alchemical machine learning interatomic potentials

Language:Jupyter NotebookLicense:MITStargazers:12Issues:3Issues:1
Language:Jupyter NotebookLicense:MITStargazers:8Issues:4Issues:0

VOID

Library to dock molecules in crystal structures, including nanoporous materials

Language:PythonLicense:MITStargazers:8Issues:3Issues:7

Zeolite-Graph-Similarity

Code for the article "Graph similarity drives zeolite diffusionless transformations and intergrowth"

Language:Jupyter NotebookLicense:MITStargazers:7Issues:3Issues:0

atom_by_atom

Atom-by-atom design of metal oxide catalysts for the oxygen evolution reaction with Machine Learning

Language:PythonStargazers:6Issues:2Issues:0

azo_barriers

Repository for computing the thermal barriers of azobenzene derivatives

Language:PythonLicense:MITStargazers:5Issues:3Issues:0

ChemArr

Chemprop model incorporating the Arrhenius equation at the output to add physics to predictions

Language:PythonLicense:MITStargazers:5Issues:3Issues:0

Zeolite-Phase-Competition

Code for: Ab initio control of zeolite phase competition and intergrowth using high-throughput simulations

Language:Jupyter NotebookLicense:MITStargazers:4Issues:1Issues:0

Perovskite-Ordering-Descriptors

Repo for our paper "Data-Driven Physics-Informed Descriptors of Cation Ordering in Multicomponent Perovskite Oxides"

Language:Jupyter NotebookLicense:MITStargazers:3Issues:3Issues:0

PerovskiteOrderingGCNNs

Repo for our paper "Learning Orderings in Crystalline Materials with Symmetry-Aware Graph Neural Networks"

Language:Jupyter NotebookLicense:MITStargazers:3Issues:3Issues:0

PerovskiteOrderingGCNNs_cgcnn

Supplementary repo for our paper "Learning Orderings in Crystalline Materials with Symmetry-Aware Graph Neural Networks"

Language:PythonLicense:MITStargazers:3Issues:1Issues:0

UQ_singleNN

Code for performing adversarial attacks on atomistic systems using NN potentials

Language:PythonLicense:MITStargazers:3Issues:0Issues:0

geodesic-interpolation-cv

Geodesic interpolation for collective variables

Language:Jupyter NotebookLicense:MITStargazers:2Issues:3Issues:0

Tutorial_ActivationFreeEnergy

Tutorial accompanying: Dietschreit, J. C. B. et al., J. Chem. Phys, 2022, "From Free-Energy Profiles to Activation Free Energies"

Language:Jupyter NotebookLicense:MITStargazers:2Issues:2Issues:0

per-site_cgcnn

Crystal graph convolutional neural networks for predicting material properties.

Language:PythonLicense:MITStargazers:1Issues:0Issues:0

per-site_painn

Fork of PaiNN for PerovskiteOrderingGCNNs

Language:PythonLicense:MITStargazers:1Issues:0Issues:0

PerovskiteOrderingGCNNs_alignn

Atomistic Line Graph Neural Network

Language:PythonLicense:NOASSERTIONStargazers:1Issues:0Issues:0

PerovskiteOrderingGCNNs_e3nn

Supplementary repo for our paper "Learning Orderings in Crystalline Materials with Symmetry-Aware Graph Neural Networks"

Language:Jupyter NotebookLicense:MITStargazers:1Issues:1Issues:0

PerovskiteOrderingGCNNs_painn

Supplementary repo for our paper "Learning Orderings in Crystalline Materials with Symmetry-Aware Graph Neural Networks"

Language:Jupyter NotebookLicense:MITStargazers:1Issues:1Issues:0

SingleAtom-LocalEnv

Active learning accelerated exploration of the single atom local environments in multimetallic systems for oxygen electrocatalysis

Language:PythonStargazers:0Issues:2Issues:0