Elliot Williams's repositories
PDBProcessor
Bash/Python script to parse PDB structural files into given subsets of that PDB file
MDTrajectoryAnalysis
Analysis of Molecular Dynamics Trajectories of a subsystem of the ribosome
A1196_Conservation_Analysis
Analysis of conservation of A1196 within the 16S/18S rRNA of the small ribosomal subunit, within all deposited ribosome structures on the RCSB
Civilization_VI_Drafter
Basic Civilization VI Drafter through the CLI with Python
CTCI_Implementations
Cracking The Coding Interview Implementations in Python
Financial-App-Analysis
Infosec Analysis of Android + Desktop Financial Apps
HousingChoice2020
A reasoned way for me to pick where I want to live in 2020-2021 during the COVID-19 Epidemic
HydroxyProlineParameterization
Parameterization of trans-3-hydroxyproline and trans-3-4-dihydroxyproline using Antechamber, for AMBER MD
NudgedElasticBand_Tutorial
Running through the NEB Tutorial for AMBER12
NullFunction
sv.ai Hackathon project for Team 'Null Function'
PDB_TLEAP_Mutator
Example code for tricking TLEAP to mutate nucleotides from PDB file inputs for use with AMBER
PDBRemovePhosphates
Script to remove 5' phosphates from nucleotide chains defined within a PDB file (necessary for importing into AMBER using TLEAP)
PNEB_Example_Run
Example run of the PNEB simulated annealing method on a ribosomal subset using AMBER 18
RCSB_Scraper
Scraping Information about particular structures from the Protein Databank
RCSB_Selenium_Scraper
Web Scraper to obtain PDB metadata and structures from the RCSB Protein Databank
RibosomeBaseMutator
Simple Python Script to mutate nucleotides, changing sequence identity in a PDB File before AMBER import
Rust-Cellular-Automata-Sandbox
Re-implementation of Sandspiel for Learning Purposes
Rust-HTTPS-Proxy
A Simple HTTPS Proxy (ideally), written in Rust
wasm_rust_sandbox
A Rust and WebAssembly tutorial implementing the Game of Life