labstreaminglayer / App-MATLABViewer

Geek Repo:Geek Repo

Github PK Tool:Github PK Tool

Overview

The MATLAB Viewer is a MATLAB function (vis_stream) that is included with the full LSL distribution. It allows you to view the signal content of any stream on your lab network in real time. It is available under Matlab or in its compiled version. There is also an alternative viewers available.

Watch the demo

Installation for Mac and Windows

After cloning the project, get the latest LSL Matlab librairies from https://github.com/labstreaminglayer/liblsl-Matlab/releases/ (note that some releases only have Windows files while others have both Mac and Windows file). This project was successfully run with liblsl-Matlab-lsl1_14-MatlabR2020a-Win64-VS2017.zip (Windows) and liblsl1_13_0_b13-MatlabR2019a-MacOS10_14.zip (MacOS).

The folder containing the LSL librairy should be name "liblsl-Matlab" (if it is not rename it) and should be placed inside this project (the path will then be automatically detected). Some releases of liblsl-Matlab do not contain a "bin" subfolders and should be avoided. The Matlab version that was used to compile "liblsl-Matlab" is not important and you may use different versions of Matlab to run the Matlab viewer.

Usage

  • Start MATLAB and add the MATLAB Viewer folder to the path, either through the GUI, under File / Set Path / Add Folder) or in the command line.

  • Make sure that you have some stream online. For a quick test you might try the AudioCaptureWin app, or the example program SendData32.exe in labstreaminglayer/LSL/liblsl/bin.

  • Now type vis_stream to bring up the viewer GUI; it should give you a window that looks like the following. If you don't have a stream online it will finish with an error message. If the program gets stuck or return an error, try instead setting parameters throught he command line to avoid having to use the graphic interfaces (which sometimes create problems). For example, type vis_stream('timerange',5)

screenshots/visstream-gui.png

  • Select the stream that you want to display. If you cannot see a stream that should be running (e.g., on another computer), read the Network Troubleshooting section on the NetworkConnectivity page. For a quick test, you might click OK right away to bring up the real-time view, or you might configure some of the display parameters first. Upon clicking okay you will get a window like the following:

screenshots/visstream-initial.png

Most likely the graph scale is initially not quite right, so you probably want to resize the data by holding down either the cursor up (scale up) or cursor down (scale down) arrow.

  • You can also adapt the time scale with the left/right cursor keys and if you have more channels than the ones that are displayed in one page, you can press page down or page up to flip through the channel pages. The number of channels per page and the initial range to display can be configured in the initial dialog.

  • The display updates in the background, so you can go ahead and open more viewports by calling vis_stream again.

GUI and Command-Line Options

The function offers a series of options that can be assigned either in the GUI, or in the command-line. To see the documentation of the options click the Help button in the GUI, which should give you a window like the following:

screenshots/visstream-docs.png

The command-line options can be passed in like in the following example:

vis_stream('StreamName','AudioCaptureWin', 'DataScale',0.01, 'SamplingRate',500)

Real-world Use

You can have multiple viewports open in MATLAB, but if you have too many, your display will become sluggish or the dialog will take a long time to come up. This is because MATLAB will use only one core for all viewports; on a multicore machine you can open multiple MATLAB instances to view even more streams simultaneously.

If you add the folder to the path permanently (by clicking Save in MATLABs Set Path dialog), you can add a shortcut to vis_stream in your MATLAB shotcuts bar (see documentation in add a shortcut), or on the Desktop by making a link to MATLAB and appending to the Target field of the shortcut the snippet -r vis_stream.

Since the function can be scripted via the command line, one can make a script that brings up all viewports that are needed to monitor a particular type of experiment with all initial parameters (including positions) pre-configured.

The MATLAB function is relatively simple and so can be customized quite easily.

Compilation notes for Windows and OSX

Make sure the program runs from the Matlab command line. You need to do that for all Matlab sessions as it adds important paths.

Invoke the Matlab Compiler App. Click on the "App" tab and select "Application compiler." If this is not available for you, it means that you do not have the Matlab compiler installed.

Add the function vis_stream_com.m (this function calls vis_stream.m but allows to set parameters on the command line for the compiled application). Manually add the library "liblsl-Matlab/bin/lsl.dll" (Windows) or sometimes "liblsl-Matlab/bin/lsl64.dll" depending on the liblsl-Matlab release. For Mac the file to add is named "liblsl-Matlab/bin/liblsl64.dylib" -- note that when the zip file of liblsl-Matlab is uncompressed, this file may actually be a symbolic link to "liblsl64.1.13.0.dylib" and cannot be used for compilation purpose. If this is the case, simply remove the symbolic link, and copy liblsl64.1.13.0.dylib onto liblsl64.dylib. Compilation for Ubuntu has not been attempted but there is no reason it should not work.

Press package. Test using the executable in "for_testing" folder. For example test using "vis_stream_comp.exe timerange 5" (setting a parameter bypasses the parameter GUI that sometimes create problems).

EEGLAB plugin release

Check out the project. Install LSL for Mac and test. Unzip LSL for windows and copy the Mex and DLL files into the bin folder of the LSL Mac version. Rename lsl.dll to liblsl64.dll, and test. Zip and release.

Caveats

Currently, marker streams are not being displayed, and streams with irregular sampling rate will not have the correct time axis.

Versions

v1.0 - Initial EEGLAB plugin release

v1.1 - Fix path issue

About


Languages

Language:MATLAB 95.9%Language:C++ 2.1%Language:C 2.1%Language:Objective-C 0.0%