labgem

labgem

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labgem's repositories

PPanGGOLiN

Build a partitioned pangenome graph from microbial genomes

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PlaScope

:microscope: :o: Plasmid exploration of bacterial genomes

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netsyn

NetSyn is a tool to detect conserved genomic contexts (i.e. synteny conservation) among a list of protein targets.

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ASMC

ASMC is a precision tool for deciphering the amino acid diversity that composes the active site of a given homologous protein family.

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microscope-user-doc

MicroScope Platform User Documentation

tenacity

Retrying library for Python

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asmc_2016

ASMC code from de Melo-Minardi et al. (2010) [doi: 10.1093/bioinformatics/btq595], updated in 2016.

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bioconda-recipes

Conda recipes for the bioconda channel.

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phigaro

Phigaro is a scalable command-line tool for predicting phages and prophages

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