kyleellefsen

Kyle Ellefsen's starred repositories

Mask_RCNN

Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow

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cocoapi

COCO API - Dataset @ http://cocodataset.org/

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vispy

Main repository for Vispy

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uvadlc_notebooks

Repository of Jupyter notebook tutorials for teaching the Deep Learning Course at the University of Amsterdam (MSc AI), Fall 2023

Language:Jupyter NotebookMIT2434 34 87

tensornets

High level network definitions with pre-trained weights in TensorFlow

Language:PythonMIT1003 52 58

CaImAn

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

Language:PythonGPL-2.0621 46 759

pims

Python Image Sequence: Load video and sequential images in many formats with a simple, consistent interface.

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spimagine

GPU accelerated volume rendering / processing in Python

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storm-analysis

STORM movie analysis code

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sima

Python package for analysis of dynamic fluorescence microscopy data

Language:PythonGPL-2.099 22 127

neurofinder

benchmarking challenge for finding neurons in imaging data

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nd2reader

Pure Python library for reading NIS Elements ND2 images and metadata

Language:PythonGPL-3.045 5 55

FakeNewsBlocker

Get a notification if a website is known to publish fake news

Language:JavaScriptAGPL-3.014 6 4

ijroi

Reads ImageJ ROI files into numpy arrays.

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detect_puffs

A set of algorithms for detecting local calcium signals from image stacks

Language:Python4 3 2

NanotubeDetection

Nanotube detection plugin for Flika. Uses filtering techniques to find straight tubules in an image

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