kvttt

Super-Simple-Raspberry-Pi-Audio-Receiver-Install

Super Easy installation to make your Raspberry Pi an Audio Receiver

F-Conv

Code of TPAMI 2022

S3Map

S3Map for fast spherical mapping of cortical surfaces

brainmorph

A Foundational Keypoint Model for Robust and Flexible Brain MRI Registration

keymorph

Robust multimodal image registration via keypoints

vfa

gadgetron

Gadgetron - Medical Image Reconstruction Framework

4DInfantAtlas

This repository contains the code for the ISBI 2024 paper "Generation of anatomy-realistic 4D infant brain atlases with tissue maps using generative adversarial networks" by Tang et al. (2024).

Torch_CG_GD

PituitarySegmentationFullPipeline

A full pipeline for multi-atlas-based pituitary segmentation.

unfoldNd

(N=1,2,3)-dimensional unfold (im2col) and fold (col2im) in PyTorch

DISCUS

The repository contains code for the Geometric Deep Learning for Diffusion MRI Signal Reconstruction with Continuous Samplings (DISCUS) project

ascii-player

Pituitary_Segmentation

Atlas-based segmentation of the pituitary

Spherical-Harmonics-Fitting

Re-implementation of the spherical harmonics fitting tools offered in DIPY.

RED

RED - Regularization by Denoising

FireANTs

Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registration

OpenBLAS

OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.

matconvnet

MatConvNet: CNNs for MATLAB

Patch2Self_MATLAB

Unofficial re-implementation of Patch2Self in MATLAB

spinalcordtoolbox

Comprehensive and open-source library of analysis tools for MRI of the spinal cord.

brainchop

Brainchop: In-browser 3D MRI rendering and segmentation

mialsuperresolutiontoolkit

The Medical Image Analysis Laboratory Super-Resolution ToolKit (MIALSRTK) consists of a set of C++ and Python processing and workflow tools necessary to perform motion-robust super-resolution fetal MRI reconstruction in the BIDS Apps framework.

indexed_gzip

Fast random access of gzip files in Python

undersample

dMRI undersampling utils

ANTs

Advanced Normalization Tools (ANTs)

patch2self2

[CVPR24] Patch2Self2: Self-supervised Denoising on Coresets via Matrix Sketching

dipy

DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

oasis-scripts

Example download scripts for the OASIS3 project

plug_and_play_admm

A simple Pytorch implementation of plug and play ADMM with examples