Kumar Saurabh Singh's repositories
comp_metabolomics_Utrecht_2022
Computational metabolomics workshop (MiCrop) 2022
distribution_of_terpene_synthases
Phylogenomic analyses and distribution of terpene synthases among Streptomyces
Stinkbug_v2.0_popgenome
Stinkbug genome (Illumina + PacBio) assembly + annotation + comparative genomics + GBS (using Stacks)
transcripts_extension
Extension of partial transcripts from de-novo transcriptome assembly using RNA-Seq datasets
Tuta_absoluta_v1.1_genome
Tuta_absoluta_genome (Illumina + PacBio + HiC) + annotation + Transcriptomics
A_global_survey_of_GPA_genomes
A global survey of genome sequence variation in the aphid, Myzus persicae provides insight into the evolution of host plant adaptation and insecticide resistance
comp-genomics-class
Code and examples for JHU Computational Genomics class
enrichment-analysis-training
Course website template by SIB
knetminer
KnetMiner - web application for gene mining and biological knowledge discovery
Maniola_jurtina_genome_sequencing
De novo genome assembly of the meadow brown butterfly, Maniola jurtina
meantools
Help pages for MEANtools
ng-tutorial
RAxML-NG tutorial: datasets and scripts
NGShelper
Helper scripts for NGS data analysis
Omics_data_integration_utilities
Integration of different Omics based data sets
POINTs
Prediction of Informative time points from time-based paired-omics datasets
SMBE-SGE-2019
Material for SMBE-SGE-2019 workshop
summer-school-multiomics-data-analysis-and-integration
Summer School Multi-omics Data Analysis and Integration
tutorials
Tutorials on phylogenetic and phylogenomic methods