Kumaran Baskaran's repositories
aromatic_interactions
Analyze the interaction between two aromatic rings
af_analysis
Chemical shift prediction for alpha fold entries
amide-aromatic
Amide-aromatic interaction in proteins
bayesian-validation
NMR structure validation using bayesian methods
BMRB-Histogram
Chemical shift histograms generated from BMRB database
bmrb-validation
Tools to validate/analyze Chemical shift data in NMR-STAR data format
BMRBCuration
Analyze and remediate incorrect ambiguity codes in BMRB
BMRBDataRemidiation
Validate BMRB entries and clean up the database
BMRBTranslator
Translates NMR Exchange Format(NEF) to NMR-STAR format
BMRBVisualization
BMRB data visualization using Plotly
csv2nmrstar
Generate NMR-STAR files from predicted chemical shifts in CSV format
general-scripts
Some general scrips written in sql, python and R for data mining
GRch38to37
Convert coordinates from GRch38 to GRch37
metabolites-analysis
Unnormalized metabolites data analysis
NEFtoNMR-STAR
Translate NMR Exchange Format (NEF) to NMR-STAR Format
NMR-STAR-Converter
NMR-STAR version converter
nmr-star-dictionary
The official NMR-STAR dictionary in use by the BMRB.
NMR-Validation
NMR Reastraint validation project for wwPDB
PyBMRB_old
Visualiztioan and Validation tools from BMRB
RamachandranPlot
generate Ramachandran plot from cif file
RestraintsValidation
NMR restraints validation
scipy_proceedings
Tools used to generate the SciPy conference proceedings
SPARKYtoNMRSTAR
NMR-STAR support for NMRFAM-SPARKY