Katherine Eaton's repositories
plague-phylogeography
Phylogeography of Yersinia pestis.
advent-of-code-2023
Advent of Code 2023 Challenge
advent-of-code-2024
Advent of Code 2024
bioconda-recipes
Conda recipes for the bioconda channel.
biowasm
WebAssembly modules for genomics
c-pdk
Extism Plug-in Development Kit (PDK) for C
deltalake-examples
Examples for working with Delta Lake tables.
dynamic_format
A workflow visualizer and orchestrator based on dynamic formatting.
egui
egui: an easy-to-use immediate mode GUI in Rust that runs on both web and native
egui_demo_app
A minimal version of the egui demo app.
GISAIDR
Programmatically interact with the GISAID database.
lr
A worse version of ls in Rust
mutation-visualizer
A mutation visualizer built with Rust.
PPanGGOLiN
Build a partitioned pangenome graph from microbial genomes
pytest-sugar
a plugin for py.test that changes the default look and feel of py.test (e.g. progressbar, show tests that fail instantly)
range-set-blaze
Integer sets as fast, sorted, integer ranges with full set operations
rasterize-string
Render a string to a png image with font picking.
rebar
REcombination BARcode detector.
RustConf2024
RustConf2024
snk
Pipeline management system and CLI generation tool
wade
WGS Analysis and Detection of Molecular Markers (WADE)
wasm
An informal playground for some wasm tests.
wasm4
Learning game dev with wasm4