Sugawara Ko's repositories
qupath-extension-sam
QuPath extension for Segment Anything Model (SAM)
qupath-extension-cellsparse
QuPath extension for Cellsparse
cellsparse-api
Cellsparse API
cellsparse-core
Cellsparse
cellsparse
Cell instance segmentation using sparse annotation
cellpose
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
CTC-IGFL-FR
Source Code used in the Cell Tracking Challenge
elephant-ctc
An executable for ELEPHANT algorithm submitted to Cell Tracking Challenge
funnel
Pouring functions into the Flask API
ImageJ
Public domain software for processing and analyzing scientific images – a.k.a. ImageJ 1.x
MobileSAM
This is a 3rd party derivative for Faster Segment Anything (MobileSAM) project that makes SAM lightweight for mobile applications and beyond!
n2v
This is the implementation of Noise2Void training.
n5-aws-s3
N5 library implementation using Amazon Web Services S3 backend.
n5-universe
Functionality shared across all n5
napari-simpleitk-image-processing
Process images using SimpleITK in napari
pytorch-stardist
PyTorch implementation of 2D and 3D StarDist - Object Detection with Star-convex Shapes
scijava-common
A plugin framework and application container with built-in extensibility mechanism :electric_plug:
scikit-image
Image processing in Python
zarr-python
An implementation of chunked, compressed, N-dimensional arrays for Python.