ksenia-krasheninnikova

breaks

Search for breakpoints in query related to reference based on the gene order

genome_comp

Comparative analysis of multiple felid genomes

paths

multiplex spectrum analysis

antelope

Analysis of copy number variations in the sable antelope genome

bioconda-recipes

Conda recipes for the bioconda channel.

bioinfo

Various bioinformatics tools

cnv_scripts

scripts for read-depth cnv annotation

MitoHiFi

Find, circularise and annotate mitogenome from PacBio assemblies

trixter

containers

Bioinformatics containers

dobby

Earth-Biogenome-Project-pilot

Assembly and Annotation workflows for analysing data in the Earth Biogenome Project pilot project.

hal

Hierarchical Alignment Format

indels

javaclasses

identify the usage frequency of public java classes in repo

ksenia-krasheninnikova.github.io

maf_breaks

multi-package-containers

Testing building mulled containers for multi-requirement tools.

nf-core-modules

Repository to host Tree of Life's Nextflow DSL2 modules, alongside nf-core's

pipelines-website

Code and files for the sanger-tol pipelines website.

te

processing of transposable elements

test-datasets

Test data to be used for automated testing with the nf-core pipelines