Kristin Fluke's repositories
BSfilter
Bisulfite-seq noise filter for eliminating reads with higher-than-expected methylation calls.
cgmaptools
toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR
Containers-Spring-2021
Repository containing Containers training materials for Feb 23 and Mar 3
CRISPR_project
Bioinformatically identifying viral invaders from on CRISPR sequences
data
Data and code behind the articles and graphics at FiveThirtyEight
fasta_to_dict
Python function to convert a fasta file to a python dictionary
general-purpose
General purpose repository to store my scripts and data
git_test
test repo from terminal
pseudoreplicate_alignment_file
This python script allows you to randomly split a sequence alignment (sam) file into several smaller file, called pseudoreplicates.
SeqFinder
Find sequences at genomic position
N4-N4-dimethylcytidine_in_Thermococcus_kodakarensis
A unique N4,N4-dimethyl cytidine in the ribosome decoding center enhances thermophily in Thermococcus kodakarensis
The_m5C-epitranscriptome_of_Thermococcus_kodakarensis
The extensive and dynamic m5C-epitranscriptome of Thermococcus kodakarensis is generated by a suite of RNA methyltransferases that support life in the extremes