Koen Rademaker's repositories
campbell-2017
Scripts and data files related to Campbell 2016 paper
cou11-data-analysis-in-R
A data analysis pipeline for RNA-Seq data in R
detect-breast-cancer-genes
A simple Python script to detect and report breast cancer genes.
essential-snippets
All the snippets that make life just a little easier.
krademaker
Config files for my GitHub profile.
krademaker.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
msc-literature-review
LaTeX files for MSc Bioinformatics literature review project on multimodal single-cell sequencing.
tagmapAnalyseR
tagmapAnalyseR package for transposon integration mapping (TagMap).
learning_pyro
Learning to work with Pyro (probabilistic programming language)
markdown-cv
a simple template to write your CV in a readable markdown file and use CSS to publish/print it.
monte_carlo_linear_classifier
Monte Carlo simulation to optimize a linear classifier.
MSc_thesis_DKFZ_reproducibility
Repository for project in Stegle and Bayraktar groups
spacexr
Spatial-eXpression-R: Cell type identification (including cell type mixtures) and cell type-specific differential expression for spatial transcriptomics
tagmap_hopping
pipeline for tagmentation on local transposon "hopping"
umcu_internship
Collection of scripts used during internship at UMC Utrecht