kpj

rwrap

Seamlessly integrate R packages into Python.

jupyfmt

The uncompromising Jupyter notebook formatter.

pdftty

A PDF viewer for the terminal

lsf_stats

Summarize LSF job properties by parsing log files.

cookiecutter-python

A cookiecutter template for modern Python packages.

metagenompy

The NCBI taxonomy as a NetworkX graph with helper functions

plyder

Simple and robust download manager with web-interface.

pyskim

Quickly create summary statistics for a given dataframe.

bin2fasta

Store any file as a fasta file.

reggy

Python package for regularized regressions.

ipy_pdcache

Automatically cache results of intensive computations in IPython.

kpj.github.io

A blog the sphinx way.

my_cool_repo

Wow, this is very cool.

AirGradient

Fun with AirGradients

blackstyle

Black for R

dotfiles

My dotfiles

monipy

Web-dashboard for resource monitoring data.

netReg

:bar_chart: Generalized linear regression models with network-regularization in R.

PianoPad

disco

Decentralized & federated privacy-preserving ML training, using p2p networking, in JS

homebrew-cask

🍻 A CLI workflow for the administration of macOS applications distributed as binaries

mega-linter

🦙 Mega-Linter analyzes 43 languages, 21 formats, 16 tooling formats , abusive copy-pastes and spelling mistakes in your repository sources , with a GitHub Action or other CI tools

mosaic

Python script for creating photomosaic images

nvidia_gpu_exporter

Nvidia GPU exporter for prometheus using nvidia-smi binary

paperless-ngx

A supercharged version of paperless: scan, index and archive all your physical documents

patchworklib

Patchwork for matplotlib: A subplot manager for intuitive layouts in matplotlib, seaborn, and plotnine.

RetroDicty

Snakemake workflow for the analysis of retrotransposition in Dictyostelium discoideum.

rna-seq-star-deseq2

RNA-seq workflow using STAR and DESeq2

snakemake

This is the development home of the workflow management system Snakemake. For general information, see

V-pipe

V-pipe is a pipeline designed for analysing NGS data of short viral genomes