kloetzl

Fabian Klötzl's repositories

biozsh

the z in bioinformatics

Language:ShellMIT32 4 8

libdna

♥ Essential Functions for DNA Manipulation

Language:CMIT20 2 23

pfasta

A Pedantic FASTA Parser and Tool Set

Language:CISC14 2 2

libmurmurhash

Portable MurmurHash Implementation

Language:C11 20

pangenomesim

♥ Simulate bacterial pangenomes.

Language:C++BSD-2-Clause5 2 2

mugsy

Mugsy - multiple whole genome alignment tool

Language:C++NOASSERTION400

biotwiddle

Bittwiddling on biological data

Language:TeX3 30

bioarch

Arch Linux PKGBUILDs for Bioinformatics

Language:ShellMIT1 20

geometree

Compute distances between phylogenetic trees

Language:Python1 20

indelible

Powerful and flexible simulator of biological evolution

Language:C++1 20

webmash

Compare Genomes in Your Browser

Language:HTML1 2 2

art

Mirror of the Set of Simulation Tools

Language:C++000

bedtools2

bedtools - the swiss army knife for genome arithmetic

Language:CMIT000

co-phylog

Co-phylog: an assembly-free phylogenomic approach for closely related organisms

Language:CGPL-3.0020

despacer

C library to remove white space from strings as fast as possible

Language:CBSD-3-Clause010

dotfiles

These are my dotfiles

Language:ShellUnlicense000

dsa5.tools

Ein alternatives Regelwiki

Language:JavaScript010

dungeon-sheets

A tool to create character sheets and GM session notes for Dungeons and Dragons fifth edition (D&D 5e).

GPL-3.0000

fur

Find Unique genomic Regions

Language:Shell000

Liederbuch

Latex template for a song book

Language:TeX020

maf2dist

Compute a distance matrix from an alignment

Language:C++ISC020

Mash

Fast genome and metagenome distance estimation using MinHash

Language:C++NOASSERTION000

meson

The Meson Build System

Language:PythonApache-2.0000

pipePlot

Read x/y data from a pipe and plot it.

Language:C020

seqan3

The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

Language:C++NOASSERTION010

snp-dists

Pairwise SNP distance matrix from a FASTA sequence alignment

Language:CGPL-3.0020

sourmash

Compute and compare MinHash signatures for DNA data sets.

Language:PythonNOASSERTION010

spaced-dna

The Spaced Words approach to alignment-free sequence comparison

Language:C++GPL-3.0020

templates

Programs for generating code templates

Language:C020

zsh-completions

Additional completion definitions for Zsh.

Language:ShellNOASSERTION020