kirilklein

ehr_preprocess

Preprocessing pipelines for various Electronic Health Records datasets, including MIMIC III.

Med-BERT

patbert

BERT-based model to obtain vector representations of patients from electronic health records.

AMAS

Advanced Methods in Applied Statistics

Applied_Statistics

BEHRT

Code for BEHRT: Transformer for Electronic Health Records

cehr-bert

CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks

CoBra

opmatch

Matching patients based on given coordinates (e.g. propensity score) under minimization of average distance.

ehr2vec

G-Bert

Pre-training of Graph Augmented Transformers for Medication Recommendation

HPC

Assignments for the High performance parallel computing course

Inverse_Problems

kirilklein.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

matching_methods

Summary of the different propensity score based matching methods.

med_study_MC

Comparison of different matching techniques in epidemiological studies.

SC_Proj

Assignments for the course scientific computing

Targeted-BEHRT

Targeted-BEHRT: Deep Learning for Observational Causal Inference on Longitudinal Electronic Health Records

weighted_stats_test

Statistical tests for weighted samples