khayer

Nugen Barcode Splitter for Illumina - This gem is designed to demultiplex reads produced by Illumina with nugen barcodes. It is using FASTX-toolkit for the barcode splitting.

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quick_rum

RUM just for tests

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ruby_on_rails_test

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ruby_rum

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scripts

These files are a random collection of scripts used for different situations. This is just a way to back them up.

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Tracking

OpenCV and Python test

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zebrafish_pipeline

UNDER CONSTRUCTION

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benchmark_quantifiers

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benchmarking_scripts

Repository to benchmark algorithms for determining expressed full length mRNA splice forms from RNA-seq data.

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differential_expression_scripts

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BHTC

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bp3_scripts

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chocomilk

Computer vision for mice behavioral experiments

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coding_exercises

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CRISPRkat

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features2table

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hamster

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hippotigris

A collection used for the SRA normalization scripts.

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ISA-templates

XML files for ISAcreator

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ITMAT_circularRNA

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random_scripts

the name says it all

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sam2cov

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sample_niner

Ruby on Rails Tutorial sample application

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Tracking2

4 box maze

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