Public repository for additional datasets for Dimorphilus gyrociliatus genome study
This repository contains:
- Dimorphilus gyrociliatus GFF annotation file for Transposable Elements and repeats (Dgyrociliatus_TEannotation.gff)
- Dimorphilus gyrociliatus GTF annotation file for filtered gene models (Dgyrociliatus_filtered_genemodels.gtf)
- Dimorphilus gyrociliatus XLS file for the functional annotation of transcripts, including best BLAST hit, PFAM domains, and GO/EGGNOG/KEGG annotations (Dgyrociliatus_functionalannotation.xls)
- Dimorphilus gyrociliatus ZIP file for intron gain/loss analyses (Dgyrociliatus_intronanalysis.zip; six tab delimited text files)
- Dimorphilus gyrociliatus BED file for IDR-filtered ATAC-seq peaks (Dgyrociliatus_ATAC_IDRpeaks.bed)
- Dimorphilus gyrociliatus TAR file with BEDGRAPH files for raw CAGE tag clusters (Dgyrociliatus_rawCAGE.tar.gz)
- Capitella teleta XLS file for the functional annotation of transcripts, including best BLAST hit, PFAM domains, and GO/EGGNOG/KEGG annotations (Cteleta_functionalannotation.xlsx; the file does not contain transcript DNA sequences, only peptide sequences)
- Helobdella robusta XLS file for the functional annotation of transcripts, including best BLAST hit, PFAM domains, and GO/EGGNOG/KEGG annotations (Hrobusta_functionalannotation.tar.gz)