kepbod

tailwindcss

A utility-first CSS framework for rapid UI development.

ML-For-Beginners

12 weeks, 26 lessons, 52 quizzes, classic Machine Learning for all

nn-zero-to-hero

Neural Networks: Zero to Hero

pytorch-deep-learning

Materials for the Learn PyTorch for Deep Learning: Zero to Mastery course.

autogluon

Fast and Accurate ML in 3 Lines of Code

PyTorch-VAE

A Collection of Variational Autoencoders (VAE) in PyTorch.

DeepLearning-MuLi-Notes

Notes about courses Dive into Deep Learning by Mu Li

list

A list of tmux plugins.

awesome-deep-learning-single-cell-papers

ffq

A tool to find sequencing data and metadata from public databases.

scRNA-seq_online

vim-easycomplete

杭州市余杭区最好用的 VIM/NVIM 代码补全插件

sceasy

A package to help convert different single-cell data formats to each other

workshop-scRNAseq

Single cell RNA sequencing analysis course

MHAP

MinHash Alignment Process (MHAP, pronounced MAP): locality-sensitive hashing to detect long-read overlaps and utilities

ATACseq

Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)

zotero-better-plugin

Make zotero7 plugins better, including note templates, tag actions, GPT command tag, etc.

dnaio

Efficiently read and write sequencing data from Python

tenx

Pipelines for the analysis of 10x single-cell RNA-sequencing data

sports1.1

Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs

shapemapper2

Public repository for ShapeMapper 2 releases

MuRaL

MuRaL is a deep learning framework for estimating single-nucleotide mutation rates across the genome.

dynast-release

Inclusive and efficient quantification of labeling and splicing RNAs for time-resolved metabolic labeling based scRNA-seq experiments

mountainClimber

bookend

End-guided RNA assembler

maxentpy

Python wrapper for MaxEntScan to calculate splice site strength.

PINTS

scallop2

REdiscoverTE

A pipeline to run REdiscoverTE tool on paired-end fastq files and creating expression matrix for genes and TEs (transposon elements)

BioR