keoughkath

AlleleAnalyzer

A software tool for personalized and allele-specific CRISPR editing.

AcceleratedRegionsNF

Pipeline to identify accelerated regions given a multiple alignment of genomes.

LAD_atlas

Supporting code from the LAD atlas paper.

basenji

Sequential regulatory activity predictions with deep convolutional neural networks.

GBGCnf

Nextflow pipeline for selection analysis accounting for GC-biased gene conversion (GBGC).

git-primer

Quick start for git

pcgc_oligo_analysis

Analysis of PCGC cohort to test oligogenic hypothesis.

PUMAS

tensorflow

Computation using data flow graphs for scalable machine learning