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Kilimanjaro Clinical Research Institute (kcri-tz)

Kilimanjaro Clinical Research Institute

kcri-tz

Geek Repo

KCRI Genomics and Bioinformatics Projects

Location:Tanzania

Home Page:https://www.kcri.ac.tz

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Kilimanjaro Clinical Research Institute's repositories

kcri-cge-bap

KCRI CGE Bacterial Analysis Pipeline

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resfinder

Slimmed down version of the CGE ResFinder source repo

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sans

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medaka

Sequence correction provided by ONT Research

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kraken2

The second version of the Kraken taxonomic sequence classification system

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mlst

Slimmed down version of the CGE MLST source repo

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hpc.kcri.it

The KCRI HPC web site

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cgmlstfinder

Slimmed down version of the CGE cgMLSTFinder source repo

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bcl-convert-deb

Repack bcl-convert in a deb package

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salmonellatypefinder

Slimmed down version of the CGE SalmonellaTypeFinder source repo

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virulencefinder

Slimmed down version of the CGE VirulenceFinder source repo

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.github

Holds the github.com/kcri-tz profile readme

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pmlst

Slimmed down version of the CGE pMLST source repo

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plasmidfinder

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kmerfinder

Slimmed down version of the CGE KmerFinder source repo

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choleraefinder

Slimmed down version of the CGE CholeraeFinder source repo

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