Katharina Hoff's repositories
GenomeAnnotation_Workshop
Materials for genome annotation sessions at the WORKSHOP ON GENOMICS, CESKY KRUMLOV
BRAKER-TSEBRA-Workshop
This repository contains course materials for a workshop on structural genome annotation with BRAKER and TSEBRA
StatisticsPython
Statistics with Python
GALBA-data
Repository that describes and contains data used for the manuscript on GALBA
PythonCompact
Python compact course (preparatory for more advanced courses)
Bioinf_pract_lecture
Lecture materials for the course "Bioinformatisches Praktikum" at University of Greifswald
compleasm
A genome completeness evaluation tool based on miniprot
EviAnn_release
This is the standalone version of the EviAnn pipeline
GeneMark-ETP
GeneMark-ETP: gene finding in eukaryotic genomes supported by transcriptome sequencing and protein homology
Liftoff
An accurate GFF3/GTF lift over pipeline
metaeuk
MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics
PhyloKernel
Mathematica code for PhyloNetReductions
pyprog
An introductory Python course for people with programming experience
Reconstruct-Parser
Parser for Reconstruct XML files of electron microscopy images with marked contours
StatistikIBilder
Bilder zu den JupyterNotebooks von Statistik I