Beast code in Giters

Karolis Ramanauskas's repositories

kakapo

A tool to extract and annotate genes from raw RNA-seq reads.

Language:PythonGPL-3.010 30

ncbi-taxonomy-local

Locally-cached NCBI Taxonomy Database for Python

Language:PythonNOASSERTION1 20

pitcairnia-dr-nrv

Language:R100

popsim

PopG clone and more!

Language:C++GPL-3.01 10

BAli-Phy

Bayesian co-estimation of phylogenies and multiple alignments via MCMC

Language:C++GPL-2.0010

CAnDI

scripts to investigate gene tree conflict with gene families

Language:PythonGPL-3.0000

conStruct

method for modeling continuous and discrete population genetic structure

Language:C++000

CS112-Green-Utilities

CS 112 - Green (Utilities)

Language:PythonNOASSERTION020

DtdAnalyzer

Language:XSLTNOASSERTION000

exonerate

A generic tool for sequence alignment

Language:CGPL-3.0010

feems

Language:Jupyter NotebookMIT000

kakapo-example

Example input & configuration files for kakapo.

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geneious_plugin_attach_aln_to_tree

Attach a Geneious alignment document to the provided Newick tree.

Language:ShellMIT010

kraken2

The second version of the Kraken taxonomic sequence classification system

Language:C++MIT010

multipledispatch

Multiple dispatch

Language:PythonNOASSERTION000

PhyloMill

Language:PythonNOASSERTION010

PhyloMill2

Language:PythonNOASSERTION000

ramanauskas-igic-2021a

Data and Scripts for RNase-based Self-incompatibility in Cacti

Language:Shell010

ramanauskas2022

Additional files for RNase-based Self-incompatibility in Lysimachia monelli (Primulaceae)

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Rcorrector

Error correction for Illumina RNA-seq reads

Language:C++GPL-3.0000

stable-diffusion-webui

Stable Diffusion Web UI

Language:PythonAGPL-3.0000