karmel / homer-idr

Applying IDR analysis to Homer peaks.

karmel/homer-idr Issues

utils.py:139: RuntimeWarning: divide by zero encountered in log10 pvals = -np.log10(pval_col)
Updated 3 years ago2
Math domain error at final output
Updated 8 years ago
Problem when running run_idr.py idr in the final steps "Error in readChar(con, 5L, useBytes = TRUE) : cannot open the connection"
Closed 8 years ago2
Not generating pseudo replicates for tag replicates
Updated 5 years ago25
How to use homer-idr to identify super enhancer with 3 ChIP-seq of H3K27ac replicates?
Updated 9 years ago1
bug in: 8. Call peaks on each of the pooled pseudoreplicate tag directories.
Closed 8 years ago3