COVID 19 Case Projection Model for Turkey
- R
- rstan & rstanarm
- tidyverse, specifically:
- ggplot2
- dplyr
- readr
- tidyr
- lubridate
- cowplot
To fit data using all observations up to latest known day and project 20 days in the future:
Rscript ModelFit.R
To fit using observations up to a certain date (e.g. May 12th, 2020):
Rscript ModelFit.R 2020-05-12
To fit using observations up to a certain date (e.g. May 12th, 2020), and project e.g. 10 days into the future from that date:
Rscript ModelFit.R 2020-05-12 10
The fit and relevant information will be saved to ./models/
, the plots to ./plots/
and tabulated projections to ./tables/
once run is complete.