Beast code in Giters

Kan Etoh's starred repositories

GSVA

Gene set variation analysis

Language:R19800

gridss

GRIDSS: the Genomic Rearrangement IDentification Software Suite

Language:JavaNOASSERTION25200

StructuralVariantAnnotation

R package designed to simplify structural variant analysis

Language:RGPL-3.06900

ComplexHeatmap

Make Complex Heatmaps

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shiny-server-arm-docker

Dockerized shiny server for armv7, arm64 and x86

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chip-atlas

ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser

Language:CSSMIT6900

GREIN

GREIN : GEO RNA-seq Experiments Interactive Navigator

Language:HTMLGPL-2.04800

tabula-muris-senis

Tabula Muris Senis

Language:Jupyter NotebookBSD-3-Clause9400

RSEM

RSEM: accurate quantification of gene and isoform expression from RNA-Seq data

Language:C++GPL-3.040900

EBSeq

EBSeq: An R package for RNA-Seq Differential Expression Analysis

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DESeq2

Differential expression of RNA-seq data using the Negative Binomial

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devtools

Tools to make an R developer's life easier

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tidyr

Tidy Messy Data

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dplyr

dplyr: A grammar of data manipulation

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ggplot2

An implementation of the Grammar of Graphics in R

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rstatix

Pipe-friendly Framework for Basic Statistical Tests in R

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ggpubr

'ggplot2' Based Publication Ready Plots

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clusterProfiler

:bar_chart: A universal enrichment tool for interpreting omics data

Language:R100700