Jake Zwart's repositories
delaware-water-temp
Data assimilation estimates of Delaware River Basin water temperature for both streams and lakes.
catchment_metab_wg
Collection of code used to analyze data for the catchment and lake metabolism working group
delaware-model-prep
Data and scripts for collecting and formatting data in the Delaware River Basin in prep for ML and DA modeling
Bayes_forecast_WG
A working group studying algae blooms in Lake Sunapee, NH
bmi-example-python
An example of wrapping a model written in Python with a BMI
drb-temp-data-release
Data release in support of water temperature modeling in the Delaware River Basin
ds-pipelines-targets-1-course
Intro to Data Analysis Pipelines using `targets` for USGS Data Science
ds-pipelines-targets-2-course
USGS targets tips and tricks: overview of conventions and best practices for using targets in USGS Data Science workflows
ds-pipelines-targets-3-course
Many-task pipelines using targets
EF_Activities
Hands-on activities associated with the Ecological Forecasting book and graduate class
EFI_aquatic_challenge_2021
Collection of code for making predictions of aquatic variables in the Ecological Forecasting Initiative's aquatic forecasting challenge - https://ecoforecast.org/efi-rcn-forecast-challenges/
forecast-data-release-v2
Data to support networked forecasting in the Delaware River Basin
habs-proxies-forecast-chl
Collection of code from the HABs Proxies group to forecast chl-a for Ecological Forecasting Challenge 2022
national-flow-observations
This repository pulls national flow data from NWIS
neon4cast
A helper R package for the neon4cast challenge
sbtools
Tools for interfacing R with ScienceBase data services
stac4cast
Serialize EFI forecast metadata according to https://stacspec.org standard
streamMetabolizer
streamMetabolizer uses inverse modeling to estimate aquatic metabolism (photosynthesis and respiration) from time series data on dissolved oxygen, water temperature, depth, and light.
taskviews
A compilation of common tasks in ecological forecasting and methods and tools to help with those tasks
usgsrc4cast-ci
Cyberinfrastructure to support the EFI-USGS River Chlorophyll Forecasting Challenge
visualize-drb-model-output
Collection of code used to visualize model output in the Delaware River Basin