jydu - Giters

Julien Y. Dutheil's repositories

The MafFilter genome alignment processor

Language:C++GPL-3.017 4 28

The Coalescent Hidden Markov Model

Language:C++GPL-3.0600

A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project.

Language:C++LGPL-3.0400

A package for detecting coevolving positions in a sequence alignment, using COsubstitution MAPping.

Language:C++NOASSERTION200

Language:C++GPL-3.0000

Bio++ Homebrew Repository

Language:RubyGPL-3.0000

Estimate recombination rates from population genetic data

Language:C000

Minima is a one-size-fits-all Jekyll theme for writers.

Language:SCSSMIT000

A regression model to infer the independent effects of genomic features on the rate of adaptive evolution

Language:PythonBSD-2-Clause000

Phylogenetic Sampling and Optimization of sequence alignments

Language:C++GPL-3.0000

Tools and Utilities for msmc and msmc2

Language:Python000

Read-only mirror of R source code from https://svn.r-project.org/R/, updated hourly. See the build instructions on the wiki page.

GPL-2.0000

R2 for correlated data; see https://academic.oup.com/sysbio/advance-article/doi/10.1093/sysbio/syy060/5098616

Language:RGPL-3.0010

Tools to handle files in the SGED (Site Group Estensible Data) format

Language:PythonGPL-3.0000