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JUMP-Cell Painting Consortium (jump-cellpainting)

JUMP-Cell Painting Consortium

jump-cellpainting

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Joint Undertaking in Morphological Profiling

Home Page:https://jump-cellpainting.broadinstitute.org/

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JUMP-Cell Painting Consortium's repositories

datasets

Images and other data from the JUMP Cell Painting Consortium

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:144Issues:13Issues:62

2024_Chandrasekaran_NatureMethods

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:46Issues:10Issues:25

JUMP-Target

Lists and 384-well plate maps of compounds and genetic perturbations designed to assess connectivity in profiling assays

License:MITStargazers:16Issues:5Issues:13

JUMP-MOA

A list of compounds with diverse MOAs that fit on a single 384-well plate, with 4 replicates per compound

License:MITStargazers:5Issues:4Issues:2

profiling-recipe

Image-based Profiling Recipe

Language:PythonLicense:BSD-3-ClauseStargazers:5Issues:3Issues:0

embedder

Computing per-cell embeddings for all cpg0016-jump

Language:PythonLicense:Apache-2.0Stargazers:2Issues:0Issues:0

compound-annotator

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:1Issues:8Issues:4

cpg0016-jump-orf-data

Data repository for cpg0016-jump[orf]

License:BSD-3-ClauseStargazers:1Issues:0Issues:0

cpg0014-jump-adipocyte-data

Data repository for cpg0014-jump-adipocyte

License:BSD-3-ClauseStargazers:0Issues:8Issues:1

jump-scope

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:0Issues:4Issues:0

jump-scope-analysis

Language:Jupyter NotebookStargazers:0Issues:9Issues:3

pilot-cpjump1-fov-data

CPJUMP1 FOV data

Language:ShellLicense:BSD-3-ClauseStargazers:0Issues:3Issues:1

pilot-data-public

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:0Issues:8Issues:0

2024_Chandrasekaran_Morphmap

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:0Issues:16Issues:0

2024_Chandrasekaran_Production

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:0Issues:1Issues:2