Early efforts to convert snorkel output to PubAnnotation format quickly implemented during the BLAH3 Hackathon.
snorkel is a framework to simplify the implementation of AI modules to learn (unsupervised) from unlabeled data.
PubAnnotation is a repository of biomedical annotations.
This repository contains, so far, a Python 3 converter function from snorkel-derived files to PubAnnotation format. The input files were somehow tweaked by Juan M. Banda, therefore may not fully represent the exact snorkel format yet.
Future changes are expected.