Juan Casal's repositories
fiji_weka_batch_classifier
Segment and detect blobs in a batch of images using an existing weka classifier in ImageJ/Fiji
foo2zjs
A linux printer driver for QPDL protocol - copy of http://foo2zjs.rkkda.com/
CHAPERONg
CHAPERONg: An automated pipeline for GROMACS MD simulations and trajectory analyses
human-generator
Data preparation and loader for AMASS
COCO2Yolo
Convert JSON annotations into YOLO format.
AdhYOLO
In this study, we extend the application of YOLO algorithms, specifically YOLOv3, YOLOv5, and YOLOv8, to the realm of cell adhesion experiments.
labelImg
LabelImg is now part of the Label Studio community. The popular image annotation tool created by Tzutalin is no longer actively being developed, but you can check out Label Studio, the open source data labeling tool for images, text, hypertext, audio, video and time-series data.
sleap
A deep learning framework for multi-animal pose tracking.
DeepLearning
This repository contains small projects related to Neural Networks and Deep Learning in general. Subjects are closely linekd with articles I publish on Medium. I encourage you both to read as well as to check how the code works in the action.
make-sense
Free to use online tool for labelling photos. https://makesense.ai
2yolo
Repository for tools to convert between annotation formats
LS-datamanager
Full-fledged Data Exploration Tool for Label Studio
YOLO-NAS_pose-estimation
Easily train or fine-tune SOTA computer vision models with one open source training library. The home of Yolo-NAS.
labelme
Image Polygonal Annotation with Python (polygon, rectangle, circle, line, point and image-level flag annotation).
label-studio-converter
Tools for converting Label Studio annotations into common dataset formats
scalabel-annotationtool
Scalabel: A versatile web-based visual data annotation tool
ONNX-YOLOv8
Python scripts performing object detection using the YOLOv8 model in ONNX.
polyply_1.0
Generate input parameters and coordinates for atomistic and coarse-grained simulations of polymers, ssDNA, and carbohydrates
ImageAI
A python library built to empower developers to build applications and systems with self-contained Computer Vision capabilities
Vina-GPU-2.0
Vina-GPU 2.0 accelerates AutoDock Vina and its related commonly derived docking methods, such as QuickVina 2 and QuickVina-W with GPUs.
Yolo-to-COCO-converter
Yolo to COCO annotation format converter
label-studio
Label Studio is a multi-type data labeling and annotation tool with standardized output format
yolov8-live-webcam
A short script showing how to build simple real-time video analytics apps using YOLOv8 and Supervision. Try it out, and most importantly have fun! 🤪