jtsumner

mlm

Snakemake workflow for processing metagenomics data and comparing the impact of different bioinformatics tools

functional_transcriptomics

Created for Winter '22 instance of Functional Genomics (BIOL SCI 378) at Northwestern University. (Forked for Winter '23)

getting-started-with-genomics-tools-and-resources

Unix, R and python tools for genomics and data science

jtsumner

Config files for my GitHub profile.

kraken2

The second version of the Kraken taxonomic sequence classification system

qpcr_analysis

Some code I like to use for analyzing qPCR data

slurm_scripts