Josh Horton (jthorton)

jthorton

Geek Repo

Company:@cole-group

Location:Newcastle University

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Organizations
asapdiscovery
cole-group

Josh Horton's repositories

de-forcefields

Transferable Double Exponential non-bonded potential for condensed phase simulations of small molecules

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double-exp-vdw

Experimental fits of a double expoential force field.

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nagl-mbis

Testing out GCNN for charge and volume prediction

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befit

Bespoke force field parameter fitting

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coding-retreat2022

Progress from the OpenMM-MACE hackathon

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de-forcefields-feedstock

A conda-smithy repository for de-forcefields.

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descent

Optimize classical force field parameters against reference data

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espaloma

Extensible Surrogate Potential of Ab initio Learned and Optimized by Message-passing Algorithm 🍹https://arxiv.org/abs/2010.01196

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EV-A71-2A-elaborations

Elaborations for the XChem fragment hits against EV A71 2A protease using FEGrow

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FEgrow

An Open-Source Molecular Builder and Free Energy Preparation Workflow

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FFDataHub

Training and testing datasets for the development of transerable force fields for molecular mechanics.

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forcebalance

Systematic force field optimization.

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graffan

Gradient based analysis of force field optimizations.

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gufe

grand unified free energy by OpenFE

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mace-off

MACE-OFF23 models

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nagl

A playground for applying graph convolutional networks to molecules.

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nagl-feedstock

A conda-smithy repository for nagl.

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openff-bespokefit-feedstock

A conda-smithy repository for openff-bespokefit.

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openff-evaluator

A physical property evaluation toolkit from the Open Forcefield Consortium.

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openmm-ml

High level API for using machine learning models in OpenMM simulations

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openmmforcefields

CHARMM and AMBER forcefields for OpenMM (with small molecule support)

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qca-dataset-submission

Data generation and submission scripts for the QCArchive ecosystem.

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QCEngine

Quantum chemistry program executor and IO standardizer (QCSchema).

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qube-ml-md

A collection of scripts to run and analyse MD simulations powered by QUBE/ML forcefields.

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QUBEKit2-data

All relevant information and input files for the testing of QUBEKit 2

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smirnoff-plugins

Plugins to enable using custom functional forms in SMIRNOFF based force fields

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smirnoff-plugins-feedstock

A conda-smithy repository for smirnoff-plugins.

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staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

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xtb-python

Python API for the extended tight binding program package

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