Jonathan Fischer's repositories
InteractiveOscillator
Interactive sensitivity analysis of my biochemical oscillator model. Uses GLMakie to allow fast and reactive resolving and plotting of the ODE solutions.
Catalyst.jl
Chemical reaction network and systems biology interface for scientific machine learning (SciML). High performance, GPU-parallelized, and O(1) solvers in open source software.
DynamicalSystems.jl
Award winning software library for nonlinear dynamics and nonlinear timeseries analysis
Evolutionary.jl
Evolutionary & genetic algorithms for Julia
jonathanfischer97
My bio README
jonathanfischer97.github.io
My website
Metaheuristics.jl
High-performance metaheuristics for optimization coded purely in Julia.
NERDSS
NonEquilibrium Reaction-Diffusion Self-assembly Simulator
Optimization.jl
Mathematical Optimization in Julia. Local, global, gradient-based and derivative-free. Linear, Quadratic, Convex, Mixed-Integer, and Nonlinear Optimization in one simple, fast, and differentiable interface.
Oscillator
For all my oscillation stuff
SciMLBase.jl
The Base interface of the SciML ecosystem