John Davey's repositories
Martin_Davey_Jiggins_evaluating_introgression_statistics
Code and data for "Evaluating statistics for the identification of introgressed loci" by Simon H. Martin, John W. Davey and Chris D. Jiggins.
Heliconius_melpomene_version_2
Heliconius melpomene genome assembly version 2
heliconius_speciation_inversions
Bespoke code for the manuscript "No evidence for maintenance of a sympatric Heliconius species barrier by chromosomal inversions"
york_gene_expression_course
Materials for the University of York Gene Expression Technologies course, differential expression sections
special_features_of_rad_sequencing
Scripts and data files for Molecular Ecology paper "Special features of RAD Sequencing: implications for genotyping", submitted to Dryad with DOI 10.5061/dryad.218p2
alignment
Script glue for short read alignment
bioconda-recipes
Conda recipes for the bioconda channel.
heliconius_wing_simulator
Scripts to generate Heliconius wing patterns
nanopolish
Signal-level algorithms for MinION data
northernbug.github.io
The NorthernBUG Website
SC-ICS-Proposal
Software Carpentry ICS proposal