joanrue's repositories
accel-large-image-proc-talk
Slides and notebook for talk: Accelerated large-scale image procesing in Python
intrinsic-manifolds
Code used for paper: Decoding brain states on the intrinsic manifold of human brain dynamics across wakefulness and sleep. Rué-Queralt et al. Communications Biology (2021)
connectome-spectral-analysis
Repository for paper https://authors.elsevier.com/sd/article/S1053-8119(21)00884-3
Source_Reconstruction_DS001
python scripts to perform EEG source reconstruction of VEP in face perception task (DS001)
cmp3-dev
Repo for development of cmp3
connectomemapper3
Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, and resting/state functional MRI processing pipelines, from raw T1 / DWI / BOLD data to multi-resolution brain parcellation with corresponding connection matrices.
memory_profiler
Monitor Memory usage of Python code
PyCartool
A simple open source Python package for I/O between Cartool and Python
pycsou
Pycsou is a Python 3 package for solving linear inverse problems with state-of-the-art proximal algorithms. The software implements in a highly modular way the main building blocks -cost functionals, penalty terms and linear operators- of generic penalised convex optimisation problems.
cupy
NumPy & SciPy for GPU
dask
Parallel computing with task scheduling
deconvolution
Deconvolution pipeline with Pyxu
nvidia_dockerfiles
Dockerfiles to test different cuda versions
orientation
Lode coordinates of structure tensor eigenvectors
pycsou-gsp
Pycsou extension module for linear inverse problems involving signals defined on non Euclidean domains represented as graphs.
radio-astro-diffusers
Image reconstruction from radio-astronomical measurements with deep-priors
tart-hvox
Implementation of the HVOX gridder for the Transient Array Radio Telescope (TART)
trove-classifiers
Canonical source for classifiers on PyPI.