jnoms

jnoms

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Twitter:@nomburg

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jnoms's repositories

virID

Viral Identification and Discovery - A viral characterization pipeline built in Nextflow.

Language:PythonLicense:MITStargazers:11Issues:3Issues:0

SAT

Structural Analysis Toolkit - A python package for manipulation of structural data and structural alignments.

Language:PythonStargazers:3Issues:1Issues:0

virORF_direct

virORF_direct: Protein-level analysis of direct RNA sequencing data

Language:PythonLicense:GPL-3.0Stargazers:3Issues:1Issues:0

virKMER

viral KMER enrichment - Used to enrich viral reads in an input dataset

Language:PythonLicense:GPL-3.0Stargazers:2Issues:1Issues:0

ESCC_microbiome

Analysis and plotting scripts for the manuscript "An international report on bacterial communities in esophageal squamous cell carcinoma"

Language:Jupyter NotebookLicense:GPL-3.0Stargazers:1Issues:1Issues:0

SV40_transcriptome

Toolkit and pipeline for processing short- and long-read RNA sequencing data.

Language:Jupyter NotebookLicense:GPL-3.0Stargazers:1Issues:1Issues:0

vpSAT

Virus Protein Structural Analysis Toolkit

Language:Jupyter NotebookLicense:MITStargazers:1Issues:1Issues:0

python_for_biologists_2023

Teaching from Python for Biologists

Language:Jupyter NotebookStargazers:0Issues:1Issues:0